| Player | Position | Team | |
|---|
| FIRST ROUND |
| 1. | Brian Anderson | LHP | Cleveland |
| 2. | Jeff Suppan | RHP | Boston |
| 3. | Gabe Alvarez | INF | San Diego |
| 4. | Jorge Fabregas | C | Chicago-AL |
| 5. | Karim Garcia | OF | Los Angeles |
| 6. | Edwin Diaz | INF | Texas |
| 7. | Cory Lidle | RHP | New York-NL |
| 8. | Joel Adamson | LHP | Milwaukee |
| 9. | Ben Ford | RHP | New York-AL |
| 10. | Yamil Benitez | OF | Kansas City |
| 11. | Neil Weber | LHP | Montreal |
| 12. | Jason Boyd | RHP | Philadelphia |
| 13. | Brent Brede | OF | Minnesota |
| 14. | Tony Batista | INF | Oakland |
| SECOND ROUND |
| 1. | Tom Martin | RHP | Houston |
| 2. | Omar Daal | LHP | Toronto |
| 3. | Scott Winchester | RHP | Cincinnati |
| 4. | Clint Sodowsky | RHP | Pittsburgh |
| 5. | Danny Klassen | INF | Milwaukee |
| 6. | Matt Drews | RHP | Detroit |
| 7. | Todd Erdos | RHP | San Diego |
| 8. | Chris Clemons | RHP | Chicago-AL |
| 9. | David Dellucci | OF | Baltimore |
| 10. | Damian Miller | C | Minnesota |
| 11. | Hector Carrasco | RHP | Kansas City |
| 12. | Hanley Frias | INF | Texas |
| 13. | Bob Wolcott | RHP | Seattle |
| 14. | Mike Bell | INF | Anaheim |
| THIRD ROUND |
| 1. | Joe Randa | INF | Pittsburgh |
| 2. | Jesus Martinez | LHP | Los Angeles |
| 3. | Russ Springer | RHP | Houston |
| 4. | Bryan Corey | RHP | Detroit |
| 5. | Kelly Stinnett | C | Milwaukee |
| 6. | Chuck McElroy | LHP | Chicago-AL |
| 7. | Marty Janzen | RHP | Toronto |
